[Gephi-plugins] Weighted modularity

Sébastien Heymann sebastien.heymann at gephi.org
Mon May 16 15:38:31 CEST 2011


Hi Xavier,

Sure that's a good idea! Just take care of the self-loop. Also don't
hesitate to discuss with Thomas Aynaud about the algorithm.

Cheers!
Sebastien

2011/5/13 Xavier Snelgrove <xs at wxs.ca>:
> Hi all,
>
> I'm looking at using the Modularity plugin to find communities in a fully-connected graph in which edge weights vary. Unfortunately, although the Lefebvre algorithm as originally published works on weighted graphs, the implementation in Gephi does not (it assumes all edges have weight 1).
>
> I would like to fix this, and can do so. I have checked out a bzr branch and can make the changes there. I'm wondering if this a change that you would be interested in including in the main Modularity module. If so I will try to build it in a way that fits your project layout.
>
> Does the following make sense?
>
>        - Add a checkbox "use weights" to the UI for the modularity statistic.
>        - Implement a method of HierarchicalGraph called getSumOfWeights(Node n) which sums the edge-weights of all edges connected to a node
>        - Edit modularity so that if "use weights" is checked, places where getTotalDegree() is used now, getSumOfWeights() is used instead.
>
> Thanks,
>        Xavier Snelgrove
>
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-- 
Sébastien Heymann
Gephi Consortium administrator
http://consortium.gephi.org/


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